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NGS Analysis Workbench

OpenAI · Scientific Research

ChatGPTApp

A journey-oriented NGS workbench for FASTQ QC, bulk RNA-seq, and single-cell RNA-seq. Focused skills establish the user's starting point, design toward a scientific outcome, bind that design to live Nextflow/nf-core or Snakemake capabilities, preserve checksum-bound native approval, and interpret completed results from file-backed evidence.

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Best rank#5Scientific ResearchCharts1Scientific ResearchHome shelves1Scientific Research · slot 5
First seenOct 5
OverviewRanks2Changes4

Rankings

Scientific Research#5

Skills

  • design-ngs-analysis
  • ngs-analysis-workbench
  • run-ngs-analysis
  • understand-ngs-data
  • understand-ngs-results

Starter prompts

  • run a FastQC and Salmon QC on a public RNA-seq dataset and provide an interpretation of the results.
  • run a scRNA-seq analysis with STARsolo on a public dataset and provide an interpretation of the results.
  • run a NGS analysis on my sequencing data in my project.